BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030G09LP1|AL429282
(931 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1659 1774 0.0
>3x_Contig1659
Length = 17570
Score = 1774 bits (893), Expect = 0.0
Identities = 920/931 (98%)
Strand = Plus / Plus
Query: 1 gaaaatgacgttggcgatggatcgctttctgatgttgcatttttctaaagggaaaagcac 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9498 gaaaatgacgttggcgatggatcgctttctgatgtagcatttttctaaagggaaaagcac 9557
Query: 61 ggtttcctcacgattgtatggtaaaatatcaagtatctctgcataccccgcccaattcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9558 ggtttcctcacgattgtatggtaaaatatcaagtatctctgcataccccgcccaattcca 9617
Query: 121 attgagantcactggaaacttcaagtttggtgtgttcaaagagaacatatcgacttctgt 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9618 attgagattcactggaaacttcaagtttggtgtgttcaaagagaacatatcgacttctgt 9677
Query: 181 ttctaatcgcttcccgtatagggcgcaatgcaattcctcatttcttattatagagagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9678 ttctaatcgcttcccgtatagggcgcaatgcaattcctcatttcttattatagagagtat 9737
Query: 241 ttccttgttcttggataagttggagtacctgctttgaaattctgccaatattttacctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9738 ttccttgttcttggataagttggagtacctgctttgaaattctgccaatattttacctct 9797
Query: 301 atgattcagcaaaataagtttctgaaatggatatttcccaattgacaagagttaatctga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 9798 atgattcagcaaaataagtttctgaaatggatatttcccaattgacaagagtaaatctga 9857
Query: 361 ttcgggctcatttgctgttcgagtaattgaaattataggcccatccgatttgaaccatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9858 ttcgggctcatttgctgttcgagtaattgaaattataggcccatccgatttgaaccatgt 9917
Query: 421 atatgccttggggccccctccattattgttgccagtatcaaaaatcattactgaaccatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9918 atatgccttggggccccctccattattgttgccagtatcaaaaatcattactgaaccatt 9977
Query: 481 tctgaatccaatgaggaatacatcctgcccaagcmagacacagctcattgcgtcgccgaa 540
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 9978 tctgaatccaatgaggaatacatcctgcccaagcaagatacagctcattgcgtcgccgaa 10037
Query: 541 ttttttcggaagtttattctcttttgaagtcttcaatcgagttccgttatattgaatcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10038 ttttttcggaagtttattctcttttgaagtcttcaatcgagttccgttatattgaatcaa 10097
Query: 601 ctggtacgctcgggatgatagaaacagaagatatgtatctgtctcattttcaaatgagtn 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10098 ctggtacgctcgggatgatagaaacagaagatatgtatctgtctcattttcaaatgagtt 10157
Query: 661 cacatcaataacttcaggtagtttcaactttcctcctgccattattttctctgttttgaa 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 10158 cacatcaataacttcaggtagtttcaactttcctcctgccattattttctctgtgttgaa 10217
Query: 721 attgaaatcattgaagcggtttatactgatggtaaattggtcgcatgtattgaagtacgt 780
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 10218 attgaaatcattgaagcggtttatactgatggtaaattggtcgcatgttttgaagtacgt 10277
Query: 781 taccgtttcatgggcggatgagtmtctattaaatgaaactttgaaggaatcatcagactc 840
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10278 taccgtttcatgggcggatgagtctctattaaatgaaactttgaaggaatcatcagactc 10337
Query: 841 atcgatagataattcaaagagacggaaacttgcatcgttcagtataatggagttaccagt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10338 atcgatagataattcaaagagacggaaacttgcatcgttcagtataatggagtgaccagt 10397
Query: 901 tcgtcccamttggatttcactgggcccctgc 931
|||||||| ||||||||||||||||||||||
Sbjct: 10398 tcgtcccatttggatttcactgggcccctgc 10428
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7738
Number of Sequences: 1807
Number of extensions: 7738
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)